scvelo.get_df¶
-
scvelo.get_df(data, keys=None, layer=None, index=None, columns=None, sort_values=None, dropna='all', precision=None)¶ Get dataframe for a specified adata key.
Return values for specified key (in obs, var, obsm, varm, obsp, varp, uns, or layers) as a dataframe.
- Parameters
- data :
AnnData AnnData object or a numpy array to get values from.
- keys :
str,List[str],None Keys from .var_names, .obs_names, .var, .obs, .obsm, .varm, .obsp, .varp, .uns, or .layers.
- layer :
str,None Layer of adata to use as expression values.
- index :
List[~T],None List to set as index.
- columns :
List[~T],None List to set as columns names.
- sort_values :
bool,None Wether to sort values by first column (sort_values=True) or a specified column.
- dropna :
_Genericalias[all, any] Drop columns/rows that contain NaNs in all (‘all’) or in any entry (‘any’).
- precision :
int,None Set precision for pandas dataframe.
- data :
- Return type
DataFrame- Returns
pd.DataFrame– A dataframe.